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|Vigna unguiculata Gene expression atlas|
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The Vigna unguiculata Gene Expression Atlas (VuGEA) Project
To aid in determining the functions of each individual gene, we have developed a gene expression atlas covering major organ systems (e.g. leaves, stem, roots, flowers, seeds and seed pods) with a detailed developmental time-series for seeds and pod walls, using de novo assembly of RNA-seq data. In the future, these data are expected to be extended to other tissues, as well as data from plants subjected to various stress conditions. In combination with the Medicago and lotus Gene Expression Atlases, we anticipate that these data will aid gene function discovery and molecular breeding efforts in legumes.
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Citation(s)Shaolun Yao, Chuan Jiang, Ziyue Huang, Ivone Torres-Jerez, Junil Chang, Heng Zhang, Michael Udvardi, Renyi Liu, and Jerome Verdier. "The Vigna unguiculata Gene Expression Atlas (VuGEA) from de novo assembly and quantification of RNA-seq data provides insights into seed maturation mechanisms." The Plant Journal 88, no. 2 (2016): 318-327.
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